RegulomeDB is a database that annotates SNPs with known and predicted regulatory elements in the intergenic regions of the H. sapiens genome. Known and predicted regulatory DNA elements include regions of DNAase hypersensitivity, binding sites of transcription factors, and promoter regions that have been biochemically characterized to regulation transcription. Source of these data include public datasets from GEO, the ENCODE project, and published literature.
To cite RegulomeDB:
Boyle AP, Hong EL, Hariharan M, Cheng Y, Schaub MA, Kasowski M, Karczewski
KJ, Park J, Hitz BC, Weng S, Cherry JM, Snyder M. Annotation of
functional variation in personal genomes using RegulomeDB. Genome Research 2012,
22(9):1790-1797. PMID: 22955989.
To contact RegulomeDB:
regulomedb@mailman.stanford.edu
A project of the Center for Genomics and Personalized Medicine at Stanford University.
RegulomeDB (TM) Copyright ©2011 The Board of Trustees of Leland Stanford Junior University. Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The RegulomeDB project at Stanford University is supported by a Genome Research Resource Grant from the US National Human Genome Research Institute, part of the US National Institutes of Health.